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  4. Evolutionary genomics of Leishmania braziliensis across the neotropical realm

Evolutionary genomics of Leishmania braziliensis across the neotropical realm

Author(s)
Mandy Sanders
Jeffrey Jon Shaw
Sinval Pinto Brandão-Filho
Mariana Côrtes Boité
Lilian Motta Cantanhêde
Khaled Chourabi
Ilse Maes
Alejandro Llanos‐Cuentas
Jorge Arévalo
Jorge D. Marco
Philippe Lemey
James A. Cotton
Jean‐Claude Dujardin
Elisa Cupolillo
Frederik Van den Broeck
Date Issued
28 de noviembre de 2024
Type
Article
Volume
7
Issue
1
Start Page
1587
End Page
1587
DOI
10.1038/s42003-024-07278-z
Abstract
The Neotropical realm, one of the most biodiverse regions on Earth, houses a broad range of zoonoses that pose serious public health threats. Protozoan parasites of the Leishmania (Viannia) braziliensis clade cause zoonotic leishmaniasis in Latin America with clinical symptoms ranging from simple cutaneous to destructive, disfiguring mucosal lesions. We present the first comprehensive genome-wide continental study including 257 cultivated isolates representing most of the geographical distribution of this major human pathogen. The L. braziliensis clade is genetically highly heterogeneous, consisting of divergent parasite groups that are associated with different environments and vary greatly in diversity. Apart from several small ecologically isolated groups with little diversity, our sampling identifies two major parasite groups, one associated with the Amazon and the other with the Atlantic Forest biomes. These groups show different recombination histories, as suggested by high levels of heterozygosity and effective population sizes in the Amazonian group in contrast to high levels of linkage and clonality in the Atlantic group. We argue that these differences are linked to strong eco-epidemiological differences between the two regions. In contrast to geographically focused studies, our study provides a broad understanding of the molecular epidemiology of zoonotic parasites circulating in tropical America.
Subjects

Biology

Clade

Amazon rainforest

Leishmania braziliens...

Leishmania

Leishmaniasis

Ecology

Genetic diversity

Range (aeronautics)

Population

Evolutionary biology

Biodiversity

Zoology

Cutaneous leishmanias...

Phylogenetics

Genetics

Parasite hosting

Gene

Environmental health

Computer science

Composite material

Materials science

Medicine

World Wide Web

Biology

Clade

Amazon rainforest

Leishmania braziliens...

Leishmania

Leishmaniasis

Ecology

Genetic diversity

Range (aeronautics)

Population

Evolutionary biology

Biodiversity

Zoology

Cutaneous leishmanias...

Phylogenetics

Genetics

Parasite hosting

Gene

Environmental health

Animals

Animals

Animals

Animals

Humans

Humans

Humans

Humans

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Leishmania braziliens...

Phylogeny

Phylogeny

Phylogeny

Phylogeny

Genetic Variation

Genetic Variation

Genetic Variation

Genetic Variation

Leishmaniasis, Cutane...

Leishmaniasis, Cutane...

Leishmaniasis, Cutane...

Leishmaniasis, Cutane...

Leishmaniasis, Cutane...

Leishmaniasis, Cutane...

Leishmaniasis, Cutane...

Leishmaniasis, Cutane...

Genome, Protozoan

Genome, Protozoan

Genome, Protozoan

Genome, Protozoan

Evolution, Molecular

Evolution, Molecular

Evolution, Molecular

Evolution, Molecular

Genomics methods

Genomics methods

Genomics methods

Genomics methods

Health Sciences Medic...

Health Sciences Medic...

Life Sciences Immunol...

Metrics
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